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ABclonal Biotechnology
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Journal: Advanced Science
Article Title: Pre‐rRNA Facilitates TopBP1‐Mediated DNA Double‐Strand Break Response
doi: 10.1002/advs.202206931
Figure Lengend Snippet: Pre‐rRNPs colocalize with TopBP1 at DSBs. A) Pre‐rRNA colocalizes with TopBP1 at DSBs. Following 10 Gy of IR treatment on HCT116 cells, RNA FISH with pre‐rRNA probes and IF with anti‐TopBP1 antibody were performed. B–D) Pre‐rRNA‐associated proteins colocalize with TopBP1 at DSBs. Following 10 Gy of IR, IF was performed with anti‐TopBP1 and anti‐RPL7A (B), or anti‐RPS3 (C), or anti‐FBL antibodies (D). E) Pre‐rRNPs localize at I‐SceI‐induced DSB. I‐SceI‐mediated DSB was induced by Dox and TA treatment in the HCT116 cells harboring a solo I‐SceI site. Then, ChIP assay with the indicated antibodies was performed. Data are represented as mean ± SD as indicated from three independent experiments. F) TopBP1 localizes at the unsynapsed region of the XY body. Meiotic spread was examined with anti‐TopBP1 antibody. Sycp3 was a surrogate marker of the unsynapsed axis of the XY body in pachytene cells. G) Pre‐rRNA localizes at the unsynapsed region. Pre‐rRNA was examined by RNA FISH with pre‐rRNA probes. H–J) Pre‐rRNA‐associated proteins localize at the unsynapsed region. Meiotic spreads were stained with anti‐Sycp3 and anti‐RPL7A (H), anti‐RPS3 (I), or anti‐FBL antibodies (J). The relative intensity of fluorescence signals is analyzed. Two‐tailed Student's t ‐test is used to determine statistical significance. *** p < 0.001, versus control groups. Scale bars, 10 µm.
Article Snippet: Detailed information of antibodies used in this study: anti‐Flag (Sigma, Rabbit, F7425), anti‐TopBP1 (Santa Cruz, Mouse, sc‐271043; BETHYL, Rabbit, A300‐111A), anti‐γH2AX (Novus, Rabbit, NB100‐384; CST, Rabbit, 9718), anti‐SCP3 (Santa Cruz, Mouse, sc‐74569; Novus, Rabbit, NB300‐232), anti‐rRNA (Novus, Mouse, NB100‐662),
Techniques: Marker, Staining, Fluorescence, Two Tailed Test